| Pathways | overlap_size | pathway_size | p-value (raw) | p-value |
|---|---|---|---|---|
| glutamate biosynthesis/degradation | 0 | 0 | 1.0 | 1.0 |
| leukotriene biosynthesis | 0 | 0 | 1.0 | 1.0 |
| pregnenolone biosynthesis | 0 | 0 | 1.0 | 1.0 |
| glutamine degradation/glutamate biosynthesis | 0 | 0 | 1.0 | 1.0 |
| androgen biosynthesis | 0 | 0 | 1.0 | 1.0 |
Full data tables from pathway analysis, module analysis and activity network are stored in the 'tsv/' directory. The tsv files can be imported into a spreadsheet program, e.g. MS Excel. Under the 'sif/' directory are files intended for Cytoscape (cytoscape.org) visualization. Please refer to Cytoscape's guides for details. Details of this run are recorded in file mummichog.log.